rs1423384 chr5:100898735 C>T

Sequence
aaaggctcttccttcccatgaatg[C/T]gaagcttgaaggatgttgccaccc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.80 0.62 0.020.43 1.07
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  cystatin c in serum,  ldl cholesterol,  ldl cholesterol change with statins,  paternal transmission distortion,  total cholesterol,  transmission distortion,  years of education
GTEx eQTL Esophagus_Mucosa,  Lung,  Nerve_Tibial

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