rs1423595 chr5:91500111 A>G
- Sequence
ctaaataggaacacattcgctagt[A/G]taaccgtttatcaccactagatgt
- ASB in cell types
- HeLa S3 (cervical adenocarcinoma) A549 (lung carcinoma) thyroid gland VCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.71 | 0.91 | 1.32 | n/a | No Hit | |||
| STAG1_HUMAN | -0.06 | 1.14 | 1.00 | n/a | n/a |
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