rs1424751 chr11:57712260 G>C
- Sequence
aatgctttcaaggagtaccccccc[G/C]ccctttctcaaggagccgcttgtc
- ASB in cell types
- HepG2 (hepatoblastoma) hMADS-3 (adipose-derived stem cells) liver BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GABPA_HUMAN CREB1_HUMAN THA11_HUMAN KLF11_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 2.22 | -0.42 | 1.40 | n/a | No Hit | |||
| CREB1_HUMAN | 2.30 | -0.14 | 1.40 | n/a | No Hit | |||
| THA11_HUMAN | 3.56 | -3.35 | 1.00 | n/a | n/a | |||
| KLF11_HUMAN | 3.06 | -3.13 | 1.00 | -3.06 | Concordant | |||
| GCR_HUMAN | 2.04 | -0.24 | 1.25 | n/a | No Hit |
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Motif analysis
