rs1425576 chr4:38078886 A>G

Sequence
gtttaatagctgtttctctgtaac[A/G]tagccacttttctctttccaggtc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.31 2.19 1.007.6·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP coronary artery disease (cad),  diastolic blood pressure (dbp),  hdl cholesterol,  infant head circumference,  ldl cholesterol,  sporadic creutzfeldt-jakob disease,  systolic blood pressure (sbp)
GTEx eQTL Cells_Cultured_fibroblasts

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