rs1425577 chr4:38078839 C>T
- Sequence
ccctggcttcctgcatggactttg[C/T]aaccagagcttcacggggtatagt
- ASB in cell types
- liver MDM(monocyte derived macrophages)
- ASB for transcription factors
- HNF4A_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | -2.52 | 2.36 | 1.25 | -0.64 | Weak Discordant | |||
| SPI1_HUMAN | 1.41 | 0.11 | 1.75 | n/a | No Hit |
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Motif analysis
