rs1426163 chr15:83747197 A>C
- Sequence
ctgccctcttgctgcaagtgtctg[A/C]aatcctagttagctgagagccagt
- ASB in cell types
- glioblastoma cells K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.01 | 1.22 | 1.17 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease, asthma, hdl cholesterol, height, recurrent major depressive disorder, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Thyroid