rs1426378 chr11:4393643 G>A

Sequence
tggggttcactcacctttacaggg[G/A]actcaacgctggtagccagctccc
ASB in cell types
K562 (myelogenous leukemia) CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 3.37 n/a 5.0·10-51.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  height,  ldl cholesterol,  nicotine dependence (smoking), smoking cessation in a trial of precessation nicotine replacement
GTEx eQTL Esophagus_Muscularis,  Lung,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Whole_Blood

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