rs1427564 chr14:56398982 A>G
- Sequence
accacttaagttgattcttaaaag[A/G]aagtgagaaattaggtaggaagtg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) monocyte-derived dendritic cells MDM(monocyte derived macrophages)
- ASB for transcription factors
- SPI1_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.23 | 2.51 | 1.40 | 6.02 | Concordant | |||
| ETS1_HUMAN | n/a | 3.00 | 1.00 | 4.67 | Concordant |
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Motif analysis
Genetic associations
GRASP chronic kidney disease, hdl cholesterol change with statins, salmonella-induced pyroptosis, serum creatinine