rs1429938 chr8:27379689 A>G
- Sequence
tcctcattacttaccttttagcac[A/G]tgcaagttaatttacgagtgagtc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ENL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ENL_HUMAN | -2.00 | 2.38 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Putamen_basal_ganglia, Brain_Substantia_nigra, Heart_Left_Ventricle, Skin_Not_Sun_Exposed_Suprapubic, Testis