rs1430015 chr2:37833492 G>C
- Sequence
aagctattctgtgcacacagtgtt[G/C]ctgggataaaacacgctagaagaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- SRF_HUMAN STAG1_HUMAN IKZF1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | 3.56 | -3.90 | 1.00 | n/a | No Hit | |||
| STAG1_HUMAN | 2.79 | -3.05 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.50 | -4.33 | 1.50 | n/a | n/a | |||
| CTCF_HUMAN | 1.40 | 0.03 | 1.14 | n/a | No Hit |
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