rs1431582 chr18:61993181 C>T

Sequence
tcactattattagtcagcatatat[C/T]gaagcatgttcactgggaaaacat
ASB in cell types
CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.71 -2.78 3.1·10-31.00 1.00 n/a n/a
STAT1_HUMAN 2.48 n/a 0.011.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP triglycerides
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellum,  Brain_Cortex,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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