rs1432561 chr2:55961513 G>T

Sequence
gtagctgccctcttgtggtcaaat[G/T]gaaagttttgcctctttgtcttaa
ASB in cell types
A549 (lung carcinoma) HeLa S3 (cervical adenocarcinoma) GBM39 (Human brain tumor)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.89 -0.20 1.9·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI pulse pressure
GRASP age at death with kuru exposure,  autism without verbal ability,  fasting blood glucose,  height,  refractive error
GTEx eQTL Adipose_Subcutaneous,  Brain_Caudate_basal_ganglia,  Brain_Frontal_Cortex_BA9,  Brain_Nucleus_accumbens_basal_ganglia,  Muscle_Skeletal,  Thyroid

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