rs1433560 chr11:109762666 G>A
- Sequence
tccaattaagaacaatgtgaaaca[G/A]gaagtgtctagagatgctgattct
- ASB in cell types
- THP-1 (acute monocytic leukemia) MDM(monocyte derived macrophages) monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.00 | 0.23 | 1.95 | -3.11 | Concordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), serum creatinine, total cholesterol