rs1433880 chr15:38941613 G>T

Sequence
ttaaggctccctgagccaggcttg[G/T]attccagagttccttatcactgtc
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SSXT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SSXT_HUMAN 2.30 -1.98 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP age at death with kuru exposure,  aortic valve calcium,  chronic kidney disease,  college completion,  comorbid depressive syndrome and alcohol dependence,  coronary artery disease (cad),  rheumatoid arthritis
GTEx eQTL Muscle_Skeletal,  Pituitary

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