rs1436004 chr8:57845288 G>T
- Sequence
aatatttattaaaccagtattgtg[G/T]gctcatttctatgctaaaccttat
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.43 | -0.08 | 1.70 | 2.87 | Discordant |
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Motif analysis
