rs1436138 chr17:77320798 A>G

Sequence
caaggctgcctcggtctcctacct[A/G]aaatagcatttctgtgccttcctg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN n/a 3.21 1.001.0·10-4 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI cardiovascular disease,  heel bone mineral density,  medication use (diuretics),  systolic blood pressure
GTEx eQTL Muscle_Skeletal

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