rs1438846 chr2:118882865 A>C
- Sequence
ctctgctggtgtctctgtgctctg[A/C]ttccttcttgctcccgcggggttc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) THP-1 (acute monocytic leukemia) WA09 (embryonic stem cells) T cells from peripheral blood
- ASB for transcription factors
- SMCA5_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA5_HUMAN | -2.24 | 2.63 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 0.32 | 0.83 | 1.47 | n/a | n/a |
Items per page:
1 – 2 of 2