rs1439469 chr4:41673397 G>T
- Sequence
agggcattccaaagaaacacattc[G/T]catttcttgtttaaggaaaataga
- ASB in cell types
- WA09 (embryonic stem cells)
- ASB for transcription factors
- NANOG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NANOG_HUMAN | 2.90 | n/a | 1.00 | 0.87 | Weak Discordant |
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Motif analysis
