rs1439619 chr15:92904401 T>G
- Sequence
ccccgtgacgtcagacggctcccc[T/G]ggggggcggggagagaacgcagtg
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) K562 (myelogenous leukemia) HAEC (human aortic endothelial cells)
- ASB for transcription factors
- VEZF1_HUMAN RBM25_HUMAN INT11_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| VEZF1_HUMAN | -4.37 | 1.97 | 2.00 | 2.64 | Concordant | |||
| RBM25_HUMAN | -0.54 | 0.67 | 1.00 | n/a | n/a | |||
| INT11_HUMAN | 1.54 | 0.36 | 1.00 | n/a | n/a |
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Motif analysis
