rs1439889 chr2:188203566 T>C
- Sequence
atttgaaaagcttattttccttct[T/C]tggttatcttacctgtcttaaaag
- ASB in cell types
- 22RV1 (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.26 | 1.66 | 2.04 | 0.60 | Weak Concordant |
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Motif analysis
