rs1439924 chr2:223459619 T>C

Sequence
tctcctaatttcagtattaaaata[T/C]ataatttttgcctgggataaatgt
ASB in cell types
neural progenitors GBM39 (Human brain tumor)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
neural progenitors 2.05 -1.70 0.031.00 1.00
GBM39 (Human brain tumor) 0.01 1.46 1.000.03 1.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa

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