rs1440100 chr2:42063929 T>C
- Sequence
catggtgactcaactcctttaaca[T/C]gctttggtgtggcacctgtcagag
- ASB in cell types
- HASM2 (Human airway smooth muscle 2) TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- GCR_HUMAN SSXT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.52 | -0.42 | 1.00 | n/a | No Hit | |||
| SSXT_HUMAN | 2.67 | -4.89 | 2.00 | n/a | n/a |
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