rs1441590 chr3:178382757 T>A
- Sequence
cacatcagaaaaatcatcaaaatg[T/A]gtgattgcaaatgttttgaaaggg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HS-ES-2M (Epithelioid sarcoma)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN SMRC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.83 | -0.08 | 1.91 | n/a | No Hit | |||
| ESR1_HUMAN | 0.56 | -0.10 | 1.67 | n/a | No Hit | |||
| SMRC1_HUMAN | 1.72 | -0.30 | 1.50 | n/a | n/a |
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