rs1441706 chr8:28622094 C>T

Sequence
ccgttcttctctagactgagctga[C/T]ctgtggtttccccagaaataaaaa
ASB in cell types
HEK293 (embryonic kidney) K562 (myelogenous leukemia)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.50 0.71 0.670.02 1.10 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  bipolar disorder,  late onset alzheimers disease,  sporadic creutzfeldt-jakob disease
GTEx eQTL Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Testis

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