rs1443285 chr17:66022019 G>A

Sequence
aaatgcacagtgcttgggaataac[G/A]taagattcccacgccccttgctac
ASB in cell types
foreskin keratinocyte GM19240 (B cells Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.04 1.81 1.004.0·10-4 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  cystatin c in serum,  hdl cholesterol change with statins,  infant head circumference,  ldl cholesterol change with statins,  total cholesterol change with statins
GTEx eQTL Muscle_Skeletal

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