rs1443921 chr1:111989945 C>T
- Sequence
gctgcctctcccgaggtccctttc[C/T]cgagggggggaggtggtgggggcg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma) G401 (rhabdoid tumor of the kidney)
- ASB for transcription factors
- SMCA4_HUMAN ANDR_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 1.74 | -0.23 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 1.99 | -0.99 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 2.41 | n/a | 2.00 | n/a | n/a |
Items per page:
1 – 3 of 3