rs1444885 chr5:38614434 A>C

Sequence
aaactcagagctcccattgagaag[A/C]gagtttataggatcatggttctgg
ASB in cell types
22RV1 (prostate carcinoma) primary prostate cancer
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -0.41 2.49 0.823.0·10-5 2.00 n/a No Hit
FOXA1_HUMAN -1.46 2.50 1.000.02 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  maternal transmission distortion,  prostate cancer,  transmission distortion

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