rs1445312 chr12:33187682 T>C

Sequence
attggaccaatgggtaaaaaaaga[T/C]agccatcagcccaagctgagtgct
ASB for transcription factors
GATA3_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN 2.82 n/a 9.8·10-61.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  hypertension (early onset hypertension),  ldl cholesterol change with statins,  obsessive-compulsive disorder (ocd),  prop taste detection threshold
GTEx eQTL Colon_Sigmoid,  Colon_Transverse,  Esophagus_Muscularis

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