rs1445627 chr3:124427497 C>T
- Sequence
cttgagaacacagccatctacagg[C/T]ggcttcccagcctacatggttaca
- ASB in cell types
- IMR-5 (Neuroblastoma)
- ASB for transcription factors
- RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.12 | -0.41 | 1.25 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP eye color, fasting insulin, hdl cholesterol, homa-b, ldl cholesterol, neuroblastoma (brain cancer), total cholesterol