rs1447093 chr4:105632207 G>C
- Sequence
aaataaaatttcaactttattgcc[G/C]tctactggtcattaaattactgca
- ASB in cell types
- 22RV1 (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.15 | 3.97 | 1.67 | 3.68 | Concordant |
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Motif analysis
