rs1447993 chr4:86936439 T>A

Sequence
gagaggcgtggagaattttgcttg[T/A]gcaagattatttcagagcaaggtc
ASB in cell types
K562 (myelogenous leukemia) foreskin keratinocyte

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.81 0.27 1.7·10-81.00 1.99
foreskin keratinocyte 1.72 -0.63 0.051.00 3.00
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  hdl cholesterol,  ldl cholesterol,  mitral annular calcium,  parkinsons disease,  triglycerides
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Thyroid

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