rs1448332 chr3:151631115 T>A

Sequence
tctctggctcctccagctgccccc[T/A]tccatcagctggtttccacaaata
ASB in cell types
RH4 (alveolar rhabdomyosarcoma)
ASB for transcription factors
MYOD1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MYOD1_HUMAN -0.81 1.90 1.000.03 2.00 -0.10 Weak Discordant
Items per page:
1 – 1 of 1

Motif analysis

MYOD1_HUMAN Weak Discordant
MYOD1_HUMAN pic

Genetic associations

GRASP diastolic blood pressure (dbp),  hdl cholesterol,  ldl cholesterol,  systolic blood pressure (sbp)
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

Download