rs1449879 chr3:17235899 A>G
- Sequence
tatcattaatctgaaggtaaacaa[A/G]tttttgttttttttttttggtaga
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.10 | 1.51 | 2.26 | -1.35 | Weak Discordant |
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Motif analysis
