rs1450951 chr5:52738222 A>T

Sequence
caaggctctcttatctcttggaca[A/T]gtgtctgctgctgctctcctggta
ASB in cell types
iPS-derived dermal fibroblasts GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RARA_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN 4.30 -4.44 2.7·10-101.00 1.00 n/a No Hit
BRD4_HUMAN n/a 2.40 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus,  height
GTEx eQTL Whole_Blood

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