rs1453754 chr3:61444111 G>A
- Sequence
gggtcaagtaatttataacacagg[G/A]caaaccacaaggtctagttgccta
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.21 | 0.38 | 1.00 | n/a | No Hit |
Items per page:
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, fasting blood glucose, hdl cholesterol, major depressive disorder (narrow definition), major depressive disorder (narrow definition) (females), recurrent early onset major depressive disorder, recurrent early onset major depressive disorder (females)