rs1453863 chr2:44168163 G>A
- Sequence
tccacacctatagctggactgctc[G/A]ttggtcccttatggcgcttctttt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- PKNX1_HUMAN LMBL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | -0.52 | 0.47 | 1.50 | 4.35 | Concordant | |||
| LMBL2_HUMAN | n/a | 0.87 | 2.00 | n/a | n/a |
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Motif analysis
