ADASTRA v6.1.1
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rs1454406
chr2:164917445
A
>
G
Sequence
ctgcaagagaggccacagattgtt[A/G]taagacttgctccaattcccagtt
ASB in cell types
foreskin keratinocyte
HUVEC-C (HUVEC, umbilical vein endothelial cells)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
0.76
n/a
8.7·10
-4
1.00
2.50
HUVEC-C (HUVEC, umbilical vein endothelial cells)
1.42
-1.37
0.03
1.00
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
hdl cholesterol
,
obesity with early age of onset (age >2)
,
triglycerides
GTEx eQTL
Brain_Cortex
,
Pancreas
,
Stomach
,
Thyroid
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Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale