rs1454406 chr2:164917445 A>G

Sequence
ctgcaagagaggccacagattgtt[A/G]taagacttgctccaattcccagtt
ASB in cell types
foreskin keratinocyte HUVEC-C (HUVEC, umbilical vein endothelial cells)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte 0.76 n/a 8.7·10-41.00 2.50
HUVEC-C (HUVEC, umbilical vein endothelial cells) 1.42 -1.37 0.031.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  hdl cholesterol,  obesity with early age of onset (age >2),  triglycerides
GTEx eQTL Brain_Cortex,  Pancreas,  Stomach,  Thyroid

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