rs1454689 chr3:191263383 G>A

Sequence
ttctcttttcatattcaagtttca[G/A]tcatgttcagaaaaataaaacaca
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.06 0.07 0.031.00 1.00 n/a n/a
IKZF1_HUMAN 1.35 -0.97 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  hdl cholesterol,  ldl cholesterol change with statins,  parkinsons disease,  total cholesterol change with statins,  triglycerides,  urinary albumin-to-creatinine ratio,  waist hip ratio

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