rs1455659 chr4:179415960 C>A

Sequence
atttgaatggaaattatttcctgg[C/A]aacttgctgctgtgagaatcccag
ASB in cell types
CFPAC-1(pancreatic ductal adenocarcinoma) pancreatic ductal adenocarcinoma
ASB for transcription factors
FOXA2_HUMAN FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN -0.65 1.41 1.009.7·10-7 1.88 n/a No Hit
FOXA1_HUMAN 0.39 1.12 1.002.2·10-3 2.03 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  eye color,  premature ovarian failure,  systolic blood pressure (sbp),  years of education

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