rs1456571 chr2:198291226 C>T
- Sequence
agatgctgtactcagggcactcag[C/T]gctacagaggagtctacaagaact
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.35 | 1.97 | 1.98 | 1.78 | Weak Concordant |
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Motif analysis
