rs1456589 chr2:40786832 C>T

Sequence
agcaattatgtttggtatttccta[C/T]tggtttatttccccatagctatga
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN NOTC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -1.89 2.84 1.000.01 2.00 n/a No Hit
NOTC1_HUMAN -4.71 2.29 1.000.04 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP mitral annular calcium
GTEx eQTL Skin_Sun_Exposed_Lower_leg

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