rs1456621 chr12:131672178 C>T

Sequence
catgtgcaaagacagaagagctga[C/T]gagggccactggggcccagccttc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN -0.33 2.47 0.910.01 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP refractive error
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Hypothalamus,  Brain_Spinal_cord_cervical_c-1,  Brain_Substantia_nigra,  Nerve_Tibial,  Testis,  Whole_Blood

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