rs1456712 chr3:108281872 G>C

Sequence
ttattattttgtggtctgtatttt[G/C]atatgtgtgtgtggatgctcaatt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -1.70 2.14 1.006.4·10-4 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  systolic blood pressure (sbp)
GTEx eQTL Colon_Transverse,  Lung,  Nerve_Tibial,  Stomach,  Whole_Blood

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