rs1456897 chr7:50159370 G>C
- Sequence
gacactgggcgcccgccagccgcg[G/C]cgcagactcccaagccgccggcag
- ASB in cell types
- T47D (invasive ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.52 | 1.60 | 1.00 | -0.92 | Weak Discordant |
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Motif analysis
