rs1458410 chr6:77624797 A>G
- Sequence
gtttactttgcgtaaaccaaacta[A/G]ttaacaggacataatttgttctct
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.64 | 2.72 | 1.68 | n/a | No Hit | |||
| HXB13_HUMAN | 1.65 | 0.13 | 1.50 | n/a | No Hit |
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