rs1459012 chr11:13503679 C>T
- Sequence
cttctggtagcaatatgtactaag[C/T]gtgattagagagtggactcttatt
- ASB in cell types
- 22RV1 (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.68 | -0.78 | 2.00 | -0.07 | Weak Concordant | |||
| ANDR_HUMAN | 2.78 | 0.42 | 2.50 | 1.60 | Weak Discordant |
Items per page:
1 – 2 of 2
Motif analysis
