rs1459220 chr2:157439616 G>C
- Sequence
ccaaaaatcatgaatgaggaactg[G/C]tgtgcaattcacagcatatgctgg
- ASB in cell types
- MDM(monocyte derived macrophages) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -3.52 | 2.50 | 2.00 | -0.40 | Weak Discordant |
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Motif analysis
