rs146809851 chr15:88913323 G>A

Sequence
cagcaggcgggggcgcggcatgct[G/A]cggggacgcgggcgctggaatggg
ASB in cell types
monocytes from periferal blood breast tumor foreskin keratinocyte
ASB for transcription factors
SRBP2_HUMAN ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN 2.82 -0.22 6.3·10-31.00 3.00 n/a No Hit
ESR1_HUMAN 2.71 -1.91 8.3·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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