rs146992819 chr17:15965809 A>T

Sequence
gccgtggcaggctacgctgcctcc[A/T]ggcccatcttagtaacagccccct
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SMCA4_HUMAN ETS1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.67 0.34 0.011.00 1.00 n/a n/a
ETS1_HUMAN 1.59 -1.51 0.031.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Muscle_Skeletal Thyroid

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