rs147167929 chr18:48951831 C>T
- Sequence
cctggcgctccggtccttctgccg[C/T]cgccaggggctcgccgcgccgcac
- ASB in cell types
- upper lobe of left lung Peyer's patch K562 (myelogenous leukemia) pancreas
- ASB for transcription factors
- CTCF_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.48 | -0.18 | 1.17 | -2.90 | Concordant | |||
| ESR1_HUMAN | 3.03 | -5.36 | 2.00 | n/a | No Hit |
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Motif analysis
